Browse of TCMCG081C39674 protein

CDS

Accession Number	TCMCG081C39674
gbkey	CDS
Protein Id	XP_010647196.1
Location	complement(join(4734..4862,12885..13227,13358..15237,15419..15848,16224..16477,16601..16810,18099..18281))
Gene	LOC100245758
GeneID	100245758
Organism	Vitis vinifera

Protein

Length	1142aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA33471
db_source	XM_010648894.2
Definition	PREDICTED: protein CROWDED NUCLEI 4 isoform X1 [Vitis vinifera]

EGGNOG-MAPPER Annotation

COG_category	S
Description	nuclear matrix constituent protein 1-like
KEGG_TC	-
KEGG_Module	M00019        [VIEW IN KEGG] M00036        [VIEW IN KEGG] M00119        [VIEW IN KEGG] M00570        [VIEW IN KEGG]
KEGG_Reaction	R01090        [VIEW IN KEGG] R01214        [VIEW IN KEGG] R02199        [VIEW IN KEGG] R10991        [VIEW IN KEGG]
KEGG_rclass	RC00006        [VIEW IN KEGG] RC00036        [VIEW IN KEGG]
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko01007        [VIEW IN KEGG]
KEGG_ko	ko:K00826        [VIEW IN KEGG]
EC	2.6.1.42        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko00270        [VIEW IN KEGG] ko00280        [VIEW IN KEGG] ko00290        [VIEW IN KEGG] ko00770        [VIEW IN KEGG] ko01100        [VIEW IN KEGG] ko01110        [VIEW IN KEGG] ko01130        [VIEW IN KEGG] ko01210        [VIEW IN KEGG] ko01230        [VIEW IN KEGG] map00270        [VIEW IN KEGG] map00280        [VIEW IN KEGG] map00290        [VIEW IN KEGG] map00770        [VIEW IN KEGG] map01100        [VIEW IN KEGG] map01110        [VIEW IN KEGG] map01130        [VIEW IN KEGG] map01210        [VIEW IN KEGG] map01230        [VIEW IN KEGG]
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005652        [VIEW IN EMBL-EBI] GO:0005694        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0006997        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009507        [VIEW IN EMBL-EBI] GO:0009536        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010369        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032535        [VIEW IN EMBL-EBI] GO:0034399        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044427        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0065008        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0090066        [VIEW IN EMBL-EBI] GO:0097298        [VIEW IN EMBL-EBI] GO:0098687        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCGAGTCCTCAACCGGCGCGATTTTCCATCGCGGCGACGCCTGGTTCTAGGGTTTTGCAAAGCCCTCTCAGTGATGATGCAATCTGGAAGCGACTCCGCGACGCTGGCTTCGATGAAGAGTCGATCAAGCGGAGGGATAAGGCTGCTCTTATCGCCTATATTGCGAAACTTGAAGCGGAGATTTTTGATCACCAACACCATATGGGACTTCTCATATTGGAAAGGAAGGAGTGGGCTACTAAGTATGAGCAAATTAAAACCGAAGCTGAATCAGCTGAAATAGTATATAAGCGTGATCAATCTGCACATTCATCTGCTTTAGCTGAAGCAAGGAAACGAGAAGACAGTCTGAAGAAGGCTTTAGAAATTGAAAAAGAGTGTATTGCAAATCTTGAGAAGGCCTTGCATGAGATGCGGCAAGAATGTGCTGAAACTAAGGTTGCAGCTGAGATTAAATTGGCTGAAGCGCACAGTATGGTAGAGGATGCACAGAAAAGGTTTGTTGAGGCTGAAGCAAAGCTGCATGCAGCAGAAGCTTTTCAAGCAGAAGCCATCTGCTTTCGCCGTACTGCTGAAAGAAAGCTACAGGAAGTTGAAGCACGTGAAGATGATCTACGGAGACGTCTGATCTCTTTCAAGTCTGACTGTGATGAAAAAGAGAAAGAGATCATTCTTGAGAGGCAGTCATTATCTGAAAGGCAGAAAAATGTGCAGCAAGGACAGGAAAGATTAATTGATGGACAAGCTTTGTTGAACCAGCGGGAAGAGTACATTTTTAGTAGATCCCAGGAATTAAATCGACTTGAGAAAGAGTTGGAGGCCTCAAAATCTAACATTGAGAAAGAACTTAGAGCCCTAAATGAAGAAAAATCTAATCTGGAGCTGAAGCTGGCTTCCTTGACAACAAGAGAGGAGGTTGGTTGTTTATATCTTTTGCTCTTTATTTATAGGAAGAGCTATTTATTTATATTCTCTTTTGAATGCGCCCAGGATGTTGTCAAAAGAGAAGCTTTGCTGAACAAGAAGGAGCATGAGATTCTTATCTTACAAGAAAAAATTGCAAGCAAGGAATCTGATGAAGTTCAAAAACTTATGGCTCTTCATGAAATTGCTTTGAAAACTAGGAAAGCTGAGTTTGAAGCAGAGCTGGAAACAAAGCGCAAGTTGGTGGAAGATGAAATTGAAGCTAAGAGACGGGCTTCGGAGTTGAGGGAGGTAGATCTTAGCAACCGGGAGGACTTTGCCTTGGAAAGGGAACATGAGTTGGAGGTTCAGTCCAGAGCACTAGCAGAGAAGGAGAAGGATGTTACAGAAAAGTTGAATTCACTTGATGAGAAAGAGAAATATCTAAATGCTGCTGAAAAAGATGTTGAGTTGGAGAAAATTCATTTGGAGAAAGAAAAAGAAGAGATCAACAAGATGAAGCTAAATATCGAGAAGTCCTTGTCTTCATTAGAAGACAAAAAGAAACAAGTTGATCATGCGAAGGAGAAAGTAGAGGCCATGAAAAGTGAAACAAGTGAGTTACTAGTTCTAGAAATGAAGCTTAAGGAAGAGATTGATGTGATCAGAGCTCAAAAACTGGAACTAATGGCTGAGGCAGATGAGTTGAGAGCACAGAAGGCAAATTTTGAAGCTGAGTGGGAATCAATTGATGAGAAAAGAGAGGAACTTCGAAATGAAGCAGAACGTATTGCTGAGGAAAGGCTAGCTATTTCCAAGTTTCTCAAGGATGAGCGTGATAGCCTGAAACTAGAGAAGGATGCCATGCGAGATCAGTATAAACAGGAGGTTGAGTCACTTTCTCGTGAGCGAGAAGACTTTATGAGTAAAATGGTGCATGAGCGTTCTGAGTGGTTCAGCAAAATTCAGCAAGAACGTGCTGATTTCTTGCTGGACATTGAGATGCAGAAGAAGGAGCTTGAGAACTGCATTGACAACAGGCGTGAAGAATTAGAGAGTTATTTCAAAGAAAGAGAGAAGACATTTGAGCAAGAAAAAATGAAGGAATTACAACATATCAGCTCAATGAAGGAAAGAGTAGCAAAAGAATTGGAACATGTTGCTTCGGAAATGAAAAGGCTTGATGCTGAAAGGATGGAGATCAATTTGGATCATGAGCGAAGGGACAGGGAATGGGCAGAACTAAGTAATTCCATTGAAGAACTTAAGATGCAAAGACAGAAGTTAAAGAAACAGAGGGAACTATTGCATGCAGATAGAAAAGAGATCCATACACAGATTGAACATCTGAAGAAATTGGAGGATTTGAAAATTGCCTCAGATAATATTGCTTTGGCTGAGATGCAGCAATCCAATCAGGAACCCAGCCAGAGAAAAGTTTATGTAAAAAGATATTATAAGGCACAAAACACAATACCCAATGCTGATTTTGAATCACATCAGAAAATAAATGTTGTGAAGAATGGCTCTGGGTTTAATTTGCCTGCTTTACCAGACAGCTCTTCTCCTTCTACTGCTACTCCTTTCTCATGGTTCAAACGATGTGCTGAATTGATATTCAAACTTTCTCCTGAGAAACCCTCAATTAAGCATGGAGAGAAGTCTTCGATATCTAACTCTGAAAATGCAAACTTGACATTGGCTGGAAATTTAGATTTGTCTGATGGATTTGATAGGGAAGTGCATGACAGAAATGAAAAGACACACAGCATCAGTGATAGACAGCCCACGAGGTATGCTCTTGGAGAACCAAAAGTGATACTGGAAGTACCTTCTTCAGGTGAGGATGTAAAAGGATTGCATACCTTGGAATCTGAAATTAAGAAAGACACCAGTGAAAACTCAAGTCACTCATTTTCTGAAAAAGAGCTTCTGGCTGGAAGGAAAAGAAGAGTTGTAAACTCTTCTTCCAATGATTGGGTTGACACAACTCTAGAGCAAAGACAGAAAAATAAGAAAAGGCGCCAACAGGAAAGTGCTGCTGATCCATGTGGGGTCTCAATACAATCAGATGCGAGAGAAGGTCAAGATGTATCAATCTCACTGAATCAAACTCAAGGAGGTGCTGAAGAGACCAATCTCTTGATAACAGATGAAATCATCAAAATTTCAGAAGTGACATGTGAAAATGTGGTCTTTGACAATCAAGCCAAACCAAATGCTTTGCAAAATTCTGTAGTGGAACTAGGTCAGGATATTCAACATGGAGGAACAAACGGCCTTGCTGATTCAAATGCAGAAAATTGTGTCCTATCCTCTGACTTTAAGGCACAGGAAAAGATAGGAAAAGAAGTGCTCTTTGTGGATGTTGGACAAGTTATTGAGCATAGTCAGCCTCAAGATGAATCCATATCCGAGAAGAGTCAACAGGAGCTTCAAGAACAGGGTGTTCCCAAGTCAGATGATGATAAGAAGTTAAGTGAGAAGGTTGGAAGACGGATGAGATCAAGACAGAAGTCATGA

Protein:   MASPQPARFSIAATPGSRVLQSPLSDDAIWKRLRDAGFDEESIKRRDKAALIAYIAKLEAEIFDHQHHMGLLILERKEWATKYEQIKTEAESAEIVYKRDQSAHSSALAEARKREDSLKKALEIEKECIANLEKALHEMRQECAETKVAAEIKLAEAHSMVEDAQKRFVEAEAKLHAAEAFQAEAICFRRTAERKLQEVEAREDDLRRRLISFKSDCDEKEKEIILERQSLSERQKNVQQGQERLIDGQALLNQREEYIFSRSQELNRLEKELEASKSNIEKELRALNEEKSNLELKLASLTTREEVGCLYLLLFIYRKSYLFIFSFECAQDVVKREALLNKKEHEILILQEKIASKESDEVQKLMALHEIALKTRKAEFEAELETKRKLVEDEIEAKRRASELREVDLSNREDFALEREHELEVQSRALAEKEKDVTEKLNSLDEKEKYLNAAEKDVELEKIHLEKEKEEINKMKLNIEKSLSSLEDKKKQVDHAKEKVEAMKSETSELLVLEMKLKEEIDVIRAQKLELMAEADELRAQKANFEAEWESIDEKREELRNEAERIAEERLAISKFLKDERDSLKLEKDAMRDQYKQEVESLSREREDFMSKMVHERSEWFSKIQQERADFLLDIEMQKKELENCIDNRREELESYFKEREKTFEQEKMKELQHISSMKERVAKELEHVASEMKRLDAERMEINLDHERRDREWAELSNSIEELKMQRQKLKKQRELLHADRKEIHTQIEHLKKLEDLKIASDNIALAEMQQSNQEPSQRKVYVKRYYKAQNTIPNADFESHQKINVVKNGSGFNLPALPDSSSPSTATPFSWFKRCAELIFKLSPEKPSIKHGEKSSISNSENANLTLAGNLDLSDGFDREVHDRNEKTHSISDRQPTRYALGEPKVILEVPSSGEDVKGLHTLESEIKKDTSENSSHSFSEKELLAGRKRRVVNSSSNDWVDTTLEQRQKNKKRRQQESAADPCGVSIQSDAREGQDVSISLNQTQGGAEETNLLITDEIIKISEVTCENVVFDNQAKPNALQNSVVELGQDIQHGGTNGLADSNAENCVLSSDFKAQEKIGKEVLFVDVGQVIEHSQPQDESISEKSQQELQEQGVPKSDDDKKLSEKVGRRMRSRQKS